PmlBeta: A PyMOL extension for building<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline" id="d1e66" altimg="si50.svg"><mml:mi>β</mml:mi></mml:math>-amino acid insertions and<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline" id="d1e71" altimg="si50.svg"><mml:mi>β</mml:mi></mml:math>-peptide sequences

New Perturbation Model for Prediction of Amino Acid and Peptide Activity Coefficients

Amino acid sequence for the peptide extension on the prolipoprotein of the Escherichia coli outer membrane.

The messenger RNA for the lipoprotein of the E. coli outer membrane was found to code for a putative precursor, prolipoprotein, which has 20 additional amino acid residues extending from the amino terminus of the lipoprotein. Using the prolipoprotein synthesized in an E. coli cell-free system directed by purified messenger RNA for the lipoprotein, the complete amino acid sequence of the amino-t...

Similarity-preserving Metrics for Amino-acid Sequences

Sequence alignments and sequence similarity scores derived from them are the most common tools for comparing amino acid and DNA sequences. Different scoring schemes, from simple +6/-1 to PAM and BLOSUM scoring matrices have been devised for highlighting particular biological or evolutionary properties of the sequences to compare. However, most methods of classical, as well as of non-parametrica...

Proso Millets Amino Acid Sequences

Seed protein of foxtai1 and proso millets were fractionated into polypeptides that were analyzed for their major protein, prolamin, and the NHrterminal amine acid seqllenccs of the proteins were determined. The proteins extracted from foxtail and proso millets were 64.1% and 80.0% prolamin, respectively. The polypeptides of the prolamins were classMed into two groups. The majer polypeptides of ...

Amino acid sequences of Clostridium pasteurianum flavodoxin.

Lys 10 10 8 4 8 7 5 12 9 13 9 Try 4 4 4 1 2 1 6 3 4 3 4 6 His 0 0 0 1 0 3 I 4 1 0 0 Arg 2 2 2 6 3 3 4 4 8 6 2 Asp 18 17 16 20 17 1 3 1 4 22 28 25 21 28 Thr 4 5 8 6 9 6 8 14 16 8 8 Ser 14 8 7 7 8 4 4 11 11 15 12 Glu 19 21 18 17 18 1 6 1 7 25 22 16 23 26 Pro 4 4 5 4 6 3 4 5 7 5 3 Gly 17 14 14 19 14 11 19 25 28 21 19 Ala 14 6 18 18 15 11 15 24 20 15 12 CvS 1 3 2 5 5 3 2 5 2 1 1 Val 15 10 13 10 16 ...